Introduction to the Species Distribution Modelling Course
  • INTRODUCTION TO THE COURSE: Instructor & Course Details
  • What is Species Distribution Modelling?
  • Data used in the course
  • Introduction to R for habitat suitability modelling
  • Conclusion to Section 1
The Basics of GIS for Species Distribution Models (SDMs)-Part 1
  • Where to Obtain Raster Data for Building SDMs
  • Accessing and Cleaning GBIF Data
  • Other Sources of Species Geo-location Data
  • Extract Species Geo-location Data from Other Sources in R
  • Access Climate & Other Data via R
  • Working With Elevation Data in R
  • Deriving Topographic Products from Elevation Data
  • Conclusions to Section 2
Pre-Processing Raster and Spatial Data for SDMs
  • Some Prerequisites
  • CRS of the Data
  • Clip Raster Data to a Given Extent
  • Resize the Raster Data
  • Basic Data Visualization
  • Conclusions to Section 3
Classical SDM Techniques
  • Underlying Rationale
  • Bioclim
  • Model Evaluation
  • Maxent Interface in R
  • Maxent SDM in R
  • Maxent Analysis with the red package
  • Domain SDM in R
  • Conclusion to Section 4
Machine Learning Models for Habitat Suitability
  • Machine Learning Modelling
  • Pre-processing Steps Prior to Modelling With Presence & Absence Data
  • Prior to Implementing Machine Learning
  • GLMs for Habitat Suitability
  • Support Vector Machines
  • kNN
  • Random Forest (RF)
  • Gradient Boosting Machine (GBM)
  • Further Model Evaluation
  • Conclusions to Section 5
Extra Lectures
  • Obtain Elevation Data rom Within R
  • Evaluate Point Density
  • Introduction to Leaflet
  • Github